<?xml version='1.0' encoding='UTF-8'?>
<metadata xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <idinfo>
    <citation>
      <citeinfo>
        <origin>Meredith Nevers</origin>
        <origin>Murulee Byappanahalli</origin>
        <origin>Dawn Shively</origin>
        <pubdate>2018</pubdate>
        <title>Identify sources of high E. coli concentrations, beaches of southern Lake Michigan, 2015, (version 2.0, July 2020)</title>
        <geoform>spreadsheet</geoform>
        <pubinfo>
          <pubplace>Reston, VA</pubplace>
          <publish>U.S. Geological Survey</publish>
        </pubinfo>
        <onlink>https://doi.org/10.5066/F7H70F3D</onlink>
      </citeinfo>
    </citation>
    <descript>
      <abstract>Data were collected as part of a study to identify sources of E. coli contamination at several beaches located in the Grand Calumet River Areas of Concern, located in northern Indiana on Lake Michigan, as well as in Illinois and Wisconsin on Lake Michigan.  Water samples were collected at each site in Indiana three times a week for thirteen weeks and at each site in Illinois and Wisconsin. All samples were analyzed for E. coli bacteria (an indicator bacteria for fecal contamination) and species-specific molecular markers (microbial source tracking, MST), including human, gull, and dog.  Presence of MST markers indicates a fecal source at that location associated with the target animal.  Field conditions were recorded during each site visit (e.g., including air and water temp, wind speed and direction, rainfall, wave height, currents, observations). Water samples were analyzed in the laboratory for E. coli using defined substrate technology and for MST markers using quantitative polymerase chain reaction (qPCR) methods and also turbidity.

Lat_long_v2 file includes information regarding sampling locations and their corresponding latitude and longitudes. The E coli_turbidity_v2 data include E. coli densities and turbidity measurements. Data from the qpcr_v4 file includes results from quantitative polymerase chain reaction (qPCR) method for detection of host-specific microbial source tracking markers. Data from SanitarySurvey includes ambient conditions measured in the field: water and air temperature, current speed and direction (eastward, westward, float method), wind direction and speed, wave height, rainfall, and cloud cover. Data from SanitarySurvey_birds included number of birds (gulls, geese, ducks, cormorants, etc.) counted on the beach and in the water. The PowerWater.pdf is the DNA extraction kits' user manual giving detailed instructions for use.</abstract>
      <purpose>These data were collected to examine potential sources of high concentrations of E. coli at shoreline locations within the Grand Calumet River Area of Concern (Indiana) and Illinois and Wisconsin using host-specific, DNA-based molecular markers. Additionally, at AOC locations, modified sanitary surveys were used; data were also used to evaluate the effectiveness of a gull deterrence program using trained canines.</purpose>
    </descript>
    <timeperd>
      <timeinfo>
        <rngdates>
          <begdate>20150611</begdate>
          <enddate>20150904</enddate>
        </rngdates>
      </timeinfo>
      <current>ground condition</current>
    </timeperd>
    <status>
      <progress>Complete</progress>
      <update>None planned</update>
    </status>
    <spdom>
      <bounding>
        <westbc>-87.8172</westbc>
        <eastbc>-87.4220</eastbc>
        <northbc>42.7616</northbc>
        <southbc>41.6414</southbc>
      </bounding>
    </spdom>
    <keywords>
      <theme>
        <themekt>ISO 19115 Topic Category</themekt>
        <themekey>environment</themekey>
      </theme>
      <theme>
        <themekt>USGS Thesaurus</themekt>
        <themekey>freshwater ecosystems</themekey>
        <themekey>water sampling</themekey>
        <themekey>polymerase chain reaction</themekey>
        <themekey>microbiology</themekey>
        <themekey>contamination and pollution</themekey>
        <themekey>environmental health (human)</themekey>
        <themekey>Great Lakes</themekey>
      </theme>
      <theme>
        <themekt>USGS Metadata Identifier</themekt>
        <themekey>USGS:5ea85e0e82cefae35a1fae4a</themekey>
      </theme>
      <place>
        <placekt>Getty Thesaurus of Geographic Names</placekt>
        <placekey>Lake Michigan</placekey>
        <placekey>Grand Calumet River</placekey>
      </place>
      <place>
        <placekt>Producer Defined</placekt>
        <placekey>Area of Concern</placekey>
      </place>
    </keywords>
    <accconst>No data access constraints</accconst>
    <useconst>No data use constraints</useconst>
    <ptcontac>
      <cntinfo>
        <cntperp>
          <cntper>Meredith Nevers</cntper>
          <cntorg>U.S. Geological, Great Lakes Science Center, Lake Michigan Ecological Research Station</cntorg>
        </cntperp>
        <cntaddr>
          <addrtype>mailing</addrtype>
          <address>1574 Kemil Road N 300 E</address>
          <city>Chesterton</city>
          <state>IN</state>
          <postal>46304</postal>
        </cntaddr>
        <cntvoice>219-926-8336 x425</cntvoice>
        <cntfax>219-929-5792</cntfax>
        <cntemail>mnevers@usgs.gov</cntemail>
      </cntinfo>
    </ptcontac>
    <datacred>Indiana Department of Environmental Management for funding</datacred>
    <native>Bio-Rad CFX Manager 3.1 was used to obtain qPCR data</native>
    <crossref>
      <citeinfo>
        <origin>Meredith B. Nevers</origin>
        <origin>Murulee N. Byappanahalli</origin>
        <origin>Dawn Shively</origin>
        <origin>Paul M. Buszka</origin>
        <origin>P. Ryan Jackson</origin>
        <origin>Mantha S. Phanikumar</origin>
        <pubdate>2018</pubdate>
        <title>Identifying and Eliminating Sources of Recreational Water Quality Degradation along an Urban Coast</title>
        <geoform>publication</geoform>
        <serinfo>
          <sername>Journal of Environment Quality</sername>
          <issue>vol. 47, issue 5</issue>
        </serinfo>
        <pubinfo>
          <pubplace>n/a</pubplace>
          <publish>American Society of Agronomy</publish>
        </pubinfo>
        <othercit>ppg. 1042</othercit>
        <onlink>https://doi.org/10.2134/jeq2017.11.0461</onlink>
      </citeinfo>
    </crossref>
    <crossref>
      <citeinfo>
        <origin>Julie Kinzelman</origin>
        <origin>M.N. Byappanahalli</origin>
        <origin>M.B. Nevers</origin>
        <origin>D. Shively</origin>
        <origin>S. Kurdas</origin>
        <origin>C. Nakatsu</origin>
        <pubdate>202011</pubdate>
        <title>Utilization of multiple microbial tools to evaluate efficacy of restoration strategies to improve recreational water quality at a Lake Michigan Beach (Racine, WI)</title>
        <geoform>publication</geoform>
        <serinfo>
          <sername>Journal of Microbiological Methods</sername>
          <issue>vol. 178</issue>
        </serinfo>
        <pubinfo>
          <pubplace>n/a</pubplace>
          <publish>Elsevier BV</publish>
        </pubinfo>
        <othercit>ppg. 106049</othercit>
        <onlink>https://doi.org/10.1016/j.mimet.2020.106049</onlink>
      </citeinfo>
    </crossref>
    <crossref>
      <citeinfo>
        <origin>Meredith B. Nevers</origin>
        <origin>Paul M. Buszka</origin>
        <origin>Muruleedhara N. Byappanahalli</origin>
        <origin>Travis Cole</origin>
        <origin>Steven R. Corsi</origin>
        <origin>P. Ryan Jackson</origin>
        <origin>Julie L. Kinzelman</origin>
        <origin>Cindy H. Nakatsu</origin>
        <origin>Mantha S. Phanikumar</origin>
        <pubdate>202204</pubdate>
        <title>Microbial source tracking and evaluation of best management practices for restoring degraded beaches of Lake Michigan</title>
        <geoform>publication</geoform>
        <serinfo>
          <sername>Journal of Great Lakes Research</sername>
          <issue>vol. 48, issue 2</issue>
        </serinfo>
        <pubinfo>
          <pubplace>n/a</pubplace>
          <publish>Elsevier BV</publish>
        </pubinfo>
        <othercit>ppg. 441-454</othercit>
        <onlink>https://doi.org/10.1016/j.jglr.2022.01.009</onlink>
      </citeinfo>
    </crossref>
  </idinfo>
  <dataqual>
    <attracc>
      <attraccr>High standard quality assurance practices were employed in laboratory and field protocols to collect the data, ensuring the accuracy of values in datasets. All technicians collecting data undergo rigorous training to adhere to SOPs. Appropriate positive and negative controls were included in all qPCR assays and inhibition determination took place on 20% of the samples. All standard curve R-squared values and amplification efficiencies were inspected. Any questionable result was reanalyzed, if sample result was still questionable, the sample was not used in analysis.</attraccr>
    </attracc>
    <logic>All standard curve R-squared values and amplification efficiencies fell within the expected ranges, water sample data did not have expected ranges. Datasets were checked for errors, including duplication or omission. All manually entered data by the technicians were checked for errors against hard copies of the data once.</logic>
    <complete>Data set is considered complete for the information presented, as described in the abstract.  Users are advised to read the rest of the metadata record carefully for additional details.</complete>
    <posacc>
      <horizpa>
        <horizpar>Coordinates were created from Google Earth or Google maps (WGS84)</horizpar>
      </horizpa>
      <vertacc>
        <vertaccr>A formal accuracy assessment of the vertical positional information in the data set has either not been conducted, or is not applicable.</vertaccr>
      </vertacc>
    </posacc>
    <lineage>
      <srcinfo>
        <srccite>
          <citeinfo>
            <origin>Andrew D. Eaton</origin>
            <origin>Lenore S. Clesceri</origin>
            <origin>Eugene W. Rice</origin>
            <origin>Arnold E. Greenburg</origin>
            <origin>Mary Ann H. Franson</origin>
            <pubdate>2005</pubdate>
            <title>Standard Methods for the Examination of Water and Wastewater, 21st Edition</title>
            <geoform>publication</geoform>
            <pubinfo>
              <pubplace>Washington, DC</pubplace>
              <publish>American Public Health Association</publish>
            </pubinfo>
            <othercit>ISBN: 0875530478 9780875530475</othercit>
            <onlink>n/a</onlink>
          </citeinfo>
        </srccite>
        <typesrc>Digital and/or Hardcopy</typesrc>
        <srctime>
          <timeinfo>
            <sngdate>
              <caldate>2005</caldate>
            </sngdate>
          </timeinfo>
          <srccurr>publication date</srccurr>
        </srctime>
        <srccitea>American Public Health Association, 2005</srccitea>
        <srccontr>Methodology used in processing step 1</srccontr>
      </srcinfo>
      <srcinfo>
        <srccite>
          <citeinfo>
            <origin>Richard L. Whitman</origin>
            <origin>Meredith B. Nevers</origin>
            <pubdate>200408</pubdate>
            <title>Escherichia coli Sampling Reliability at a Frequently Closed Chicago Beach:  Monitoring and Management Implications</title>
            <geoform>publication</geoform>
            <serinfo>
              <sername>Environmental Science &amp; Technology</sername>
              <issue>vol. 38, issue 16</issue>
            </serinfo>
            <pubinfo>
              <pubplace>n/a</pubplace>
              <publish>American Chemical Society (ACS)</publish>
            </pubinfo>
            <othercit>ppg. 4241-4246</othercit>
            <onlink>https://doi.org/10.1021/es034978i</onlink>
          </citeinfo>
        </srccite>
        <typesrc>Digital and/or Hardcopy</typesrc>
        <srctime>
          <timeinfo>
            <sngdate>
              <caldate>20040710</caldate>
            </sngdate>
          </timeinfo>
          <srccurr>publication date</srccurr>
        </srctime>
        <srccitea>Whitman and Nevers, 2004</srccitea>
        <srccontr>Methodology used in step process 1</srccontr>
      </srcinfo>
      <srcinfo>
        <srccite>
          <citeinfo>
            <origin>World Health Organization</origin>
            <pubdate>19990301</pubdate>
            <title>Health-based monitoring of recreational waters: The feasibility of a new approach (The "Annapolis Protocol")</title>
            <geoform>publication</geoform>
            <pubinfo>
              <pubplace>Geneva, Switzerland</pubplace>
              <publish>World Health Organization</publish>
            </pubinfo>
            <othercit>Technical document: Government Document number WHO/SDE/WSH/99.1</othercit>
            <onlink>https://www.who.int/water_sanitation_health/bathing/annapolis.pdf</onlink>
          </citeinfo>
        </srccite>
        <typesrc>Digital and/or Hardcopy</typesrc>
        <srctime>
          <timeinfo>
            <sngdate>
              <caldate>19990301</caldate>
            </sngdate>
          </timeinfo>
          <srccurr>publication date</srccurr>
        </srctime>
        <srccitea>World Health Organization, 1999</srccitea>
        <srccontr>Methodology used in processing step 1</srccontr>
      </srcinfo>
      <srcinfo>
        <srccite>
          <citeinfo>
            <origin>Stephen C Edberg</origin>
            <origin>Martin J Allen</origin>
            <origin>Darrell B Smith</origin>
            <pubdate>20200114</pubdate>
            <title>Defined Substrate Technology Method for Rapid and Specific Simultaneous Enumeration of Total Coliforms and Escherichia coli from Water: Collaborative Study</title>
            <geoform>publication</geoform>
            <serinfo>
              <sername>Journal of AOAC INTERNATIONAL</sername>
              <issue>vol. 74, issue 3</issue>
            </serinfo>
            <pubinfo>
              <pubplace>n/a</pubplace>
              <publish>Oxford University Press (OUP)</publish>
            </pubinfo>
            <othercit>ppg. 526-529</othercit>
            <onlink>https://doi.org/10.1093/jaoac/74.3.526</onlink>
          </citeinfo>
        </srccite>
        <typesrc>Digital and/or Hardcopy</typesrc>
        <srctime>
          <timeinfo>
            <sngdate>
              <caldate>19910501</caldate>
            </sngdate>
          </timeinfo>
          <srccurr>publication date</srccurr>
        </srctime>
        <srccitea>Edberg, Allen et al, 1991</srccitea>
        <srccontr>Methodology used in processing step 2</srccontr>
      </srcinfo>
      <srcinfo>
        <srccite>
          <citeinfo>
            <origin>Linda K. Dick</origin>
            <origin>Michael T. Simonich</origin>
            <origin>Katharine G. Field</origin>
            <pubdate>200506</pubdate>
            <title>Microplate Subtractive Hybridization To Enrich for Bacteroidales Genetic Markers for Fecal Source Identification</title>
            <geoform>publication</geoform>
            <serinfo>
              <sername>Applied and Environmental Microbiology</sername>
              <issue>vol. 71, issue 6</issue>
            </serinfo>
            <pubinfo>
              <pubplace>n/a</pubplace>
              <publish>American Society for Microbiology</publish>
            </pubinfo>
            <othercit>ppg. 3179-3183</othercit>
            <onlink>https://doi.org/10.1128/AEM.71.6.3179-3183.2005</onlink>
          </citeinfo>
        </srccite>
        <typesrc>Digital and/or Hardcopy</typesrc>
        <srctime>
          <timeinfo>
            <sngdate>
              <caldate>200506</caldate>
            </sngdate>
          </timeinfo>
          <srccurr>publication date</srccurr>
        </srctime>
        <srccitea>Dick, L., et al., 2005</srccitea>
        <srccontr>Methodology used in processing step 3</srccontr>
      </srcinfo>
      <srcinfo>
        <srccite>
          <citeinfo>
            <origin>John F. Griffith</origin>
            <origin>Blythe A. Layton</origin>
            <origin>Alexandria B. Boehm</origin>
            <origin>Patricia Holden</origin>
            <origin>Jennifer A. Jay</origin>
            <origin>Charles Hagedorn</origin>
            <origin>Charles D. McGee</origin>
            <origin>Steven B. Weisberg</origin>
            <pubdate>20131201</pubdate>
            <title>The California Microbial Source Identification Manual: A Tiered Approach to Identifying Fecal Pollution Sources to Beaches</title>
            <geoform>publication</geoform>
            <othercit>Technical report 804</othercit>
            <onlink>https://www.waterboards.ca.gov/water_issues/programs/beaches/cbi_projects/docs/sipp_manual.pdf</onlink>
          </citeinfo>
        </srccite>
        <typesrc>Digital and/or Hardcopy</typesrc>
        <srctime>
          <timeinfo>
            <sngdate>
              <caldate>20131201</caldate>
            </sngdate>
          </timeinfo>
          <srccurr>publication date</srccurr>
        </srctime>
        <srccitea>Griffith, J. F., et al, 2013</srccitea>
        <srccontr>Methodology used in processing step 3</srccontr>
      </srcinfo>
      <srcinfo>
        <srccite>
          <citeinfo>
            <origin>Hyatt C. Green</origin>
            <origin>Richard A. Haugland</origin>
            <origin>Manju Varma</origin>
            <origin>Hana T. Millen</origin>
            <origin>Mark A. Borchardt</origin>
            <origin>Katharine G. Field</origin>
            <origin>William A. Walters</origin>
            <origin>R. Knight</origin>
            <origin>Mano Sivaganesan</origin>
            <origin>Catherine A. Kelty</origin>
            <origin>Orin C. Shanks</origin>
            <pubdate>20140307</pubdate>
            <title>Improved HF183 Quantitative Real-Time PCR Assay for Characterization of Human Fecal Pollution in Ambient Surface Water Samples</title>
            <geoform>publication</geoform>
            <serinfo>
              <sername>Applied and Environmental Microbiology</sername>
              <issue>vol. 80, issue 10</issue>
            </serinfo>
            <pubinfo>
              <pubplace>n/a</pubplace>
              <publish>American Society for Microbiology</publish>
            </pubinfo>
            <othercit>ppg. 3086-3094</othercit>
            <onlink>https://doi.org/10.1128/AEM.04137-13</onlink>
          </citeinfo>
        </srccite>
        <typesrc>Digital and/or Hardcopy</typesrc>
        <srctime>
          <timeinfo>
            <sngdate>
              <caldate>20140307</caldate>
            </sngdate>
          </timeinfo>
          <srccurr>publication date</srccurr>
        </srctime>
        <srccitea>Green, Hyatt C., et al, 2014</srccitea>
        <srccontr>Methodology used in processing step 3</srccontr>
      </srcinfo>
      <srcinfo>
        <srccite>
          <citeinfo>
            <origin>C. Johnston</origin>
            <origin>J.A. Ufnar</origin>
            <origin>J.F. Griffith</origin>
            <origin>J.A. Gooch</origin>
            <origin>J.R. Stewart</origin>
            <pubdate>20101112</pubdate>
            <title>A real-time qPCR assay for the detection of the nifH gene of Methanobrevibacter smithii, a potential indicator of sewage pollution</title>
            <geoform>publication</geoform>
            <serinfo>
              <sername>Journal of Applied Microbiology</sername>
              <issue>vol. 109, issue 6</issue>
            </serinfo>
            <pubinfo>
              <pubplace>n/a</pubplace>
              <publish>Wiley</publish>
            </pubinfo>
            <othercit>ppg. 1946-1956</othercit>
            <onlink>https://doi.org/10.1111/j.1365-2672.2010.04824.x</onlink>
          </citeinfo>
        </srccite>
        <typesrc>Digital and/or Hardcopy</typesrc>
        <srctime>
          <timeinfo>
            <sngdate>
              <caldate>20101112</caldate>
            </sngdate>
          </timeinfo>
          <srccurr>publication date</srccurr>
        </srctime>
        <srccitea>Johnston, C., et al., 2010</srccitea>
        <srccontr>Methodology used in processing step 3</srccontr>
      </srcinfo>
      <srcinfo>
        <srccite>
          <citeinfo>
            <origin>Jingrang Lu</origin>
            <origin>Jorge W. Santo Domingo</origin>
            <origin>Regina Lamendella</origin>
            <origin>Thomas Edge</origin>
            <origin>Stephen Hill</origin>
            <pubdate>20080701</pubdate>
            <title>Phylogenetic Diversity and Molecular Detection of Bacteria in Gull Feces</title>
            <geoform>publication</geoform>
            <serinfo>
              <sername>Applied and Environmental Microbiology</sername>
              <issue>vol. 74, issue 13</issue>
            </serinfo>
            <pubinfo>
              <pubplace>n/a</pubplace>
              <publish>American Society for Microbiology</publish>
            </pubinfo>
            <othercit>ppg. 3969-3976</othercit>
            <onlink>https://doi.org/10.1128/AEM.00019-08</onlink>
          </citeinfo>
        </srccite>
        <typesrc>Digital and/or Hardcopy</typesrc>
        <srctime>
          <timeinfo>
            <sngdate>
              <caldate>20080701</caldate>
            </sngdate>
          </timeinfo>
          <srccurr>publication date</srccurr>
        </srctime>
        <srccitea>Lu, J., J.W, 2008</srccitea>
        <srccontr>Methodology used in processing step 3</srccontr>
      </srcinfo>
      <srcinfo>
        <srccite>
          <citeinfo>
            <origin>C. Johnston</origin>
            <origin>J.A. Ufnar</origin>
            <origin>J.F. Griffith</origin>
            <origin>J.A. Gooch</origin>
            <origin>J.R. Stewart</origin>
            <pubdate>20101112</pubdate>
            <title>A real-time qPCR assay for the detection of the nifH gene of Methanobrevibacter smithii, a potential indicator of sewage pollution</title>
            <geoform>publication</geoform>
            <serinfo>
              <sername>Journal of Applied Microbiology</sername>
              <issue>vol. 109, issue 6</issue>
            </serinfo>
            <pubinfo>
              <pubplace>n/a</pubplace>
              <publish>Wiley</publish>
            </pubinfo>
            <othercit>ppg. 1946-1956</othercit>
            <onlink>https://doi.org/10.1111/j.1365-2672.2010.04824.x</onlink>
          </citeinfo>
        </srccite>
        <typesrc>Digital and/or Hardcopy</typesrc>
        <srctime>
          <timeinfo>
            <sngdate>
              <caldate>20101112</caldate>
            </sngdate>
          </timeinfo>
          <srccurr>publication date</srccurr>
        </srctime>
        <srccitea>Gentry-Shields, J. R., et al, 2012</srccitea>
        <srccontr>Methodology used in processing step 3</srccontr>
      </srcinfo>
      <procstep>
        <procdesc>Field Collections:

Water samples were collected in triplicate 3 times a week for 13 weeks between 6/11/15 and 9/4/15. At each of four Indiana shoreline locations (HW, HE, WH, JP1 and JP2) and the Grand Calumet River (GC) and individual water samples at each of two Illinois (63-1 and 63-2) and four Wisconsin (N1-4) shoreline locations were collected 1 day a week between 6/11/15 and 8/20/15  Samples were collected using sterile Nalgene plastic bottles following protocols outlined in Standard Methods (American Public Health Association 2005), USGS protocols (Whitman and Nevers 2004), and Annapolis Protocol (World Health Organization 1999). Samples were collected in ~45 cm-deep water, 10 cm below the surface; GC samples were collected from an overhead bridge using a sterile bucket. Samples were transported to the laboratory in a cooler, on ice, and analyzed or filtered within 6 hr of collection. Sanitary surveys were performed at the IN shoreline locations, including ambient conditions and number of birds (gulls, geese, ducks, cormorants, etc.) in the water and on the beach. 

Citations:

American Public Health Association. 2005. Standard Methods for the Examination of Water and Wastewater, 21st Edition. American Public Health Association, Washington, D.C.

Whitman, R.L., and M.B. Nevers. 2004. Escherichia coli sampling reliability at a frequently closed Chicago beach: Monitoring and management implications. Environ. Sci. Technol. 38:4241-4246.

World Health Organization. 1999. Health-based monitoring of recreational waters: The feasibility of a new approach (The "Annapolis Protocol") WHO/SDE/WSH/99.1. World Health Organization, Sustainable Development and Healthy Environments, Geneva.</procdesc>
        <srcused>American Public Health Association, 2005</srcused>
        <srcused>Whitman and Nevers, 2004</srcused>
        <srcused>World Health Organization, 1999</srcused>
        <procdate>20150904</procdate>
        <proccont>
          <cntinfo>
            <cntperp>
              <cntper>Katarzyna Przybyla-Kelly</cntper>
              <cntorg>U.S. Geological, Great Lakes Science Center, Lake Michigan Ecological Research Station</cntorg>
            </cntperp>
            <cntpos>Biological Technician</cntpos>
            <cntaddr>
              <addrtype>mailing address</addrtype>
              <address>1574 Kemil Road N 300 E</address>
              <city>Chesterton</city>
              <state>IN</state>
              <postal>46304</postal>
              <country>United States</country>
            </cntaddr>
            <cntvoice>219-926-8336</cntvoice>
            <cntfax>219-929-5792</cntfax>
            <cntemail>kprzybyla-kelly@usgs.gov</cntemail>
          </cntinfo>
        </proccont>
      </procstep>
      <procstep>
        <procdesc>E. coli analysis: 

Water samples (generally 100 mL) were analyzed for E. coli using the IDEXX Colilert®-18 and Quanti-Tray® 2000 method (IDEXX Laboratories, Westbrook, Maine), a defined substrate technology (Edberg, Allen et al. 1991), with results provided as most probable number (MPN)/100 mL.

Citation:

Edberg, S.C., M.J. Allen, and D.B. Smith. 1991. Defined substrate technology method for rapid and specific simultaneous enumeration of total coliforms and Escherichia coli from water: Collaborative study. J. Assoc. Off. Anal. Chem. 74:526-529.</procdesc>
        <srcused>Edberg, Allen et al, 1991</srcused>
        <procdate>20150904</procdate>
        <proccont>
          <cntinfo>
            <cntperp>
              <cntper>Dawn A Shively</cntper>
              <cntorg>U.S. Geological, Great Lakes Science Center, Lake Michigan Ecological Research Station</cntorg>
            </cntperp>
            <cntpos>Biological Technician</cntpos>
            <cntaddr>
              <addrtype>mailing address</addrtype>
              <address>1574 Kemil Road N 300 E</address>
              <city>Chesterton</city>
              <state>IN</state>
              <postal>46304</postal>
              <country>United States</country>
            </cntaddr>
            <cntvoice>219-926-8336 x427</cntvoice>
            <cntfax>219-929-5792</cntfax>
            <cntemail>dshively@usgs.gov</cntemail>
          </cntinfo>
        </proccont>
      </procstep>
      <procstep>
        <procdesc>qPCR for Microbial Source Tracking markers:

All water samples (1000 mL) were pre-filtered through 5-µm nitrocellulose filters followed by a final filtration onto 0.22-µm nitrocellulose filters (EMD Millipore, Billerica, MA).  The latter were placed in Mo Bio PowerWater® bead tubes (MO BIO Laboratories, Carlsbad, CA) and held at -80ºC until processing. The WI water samples were processed by City of Racine Health Department in a similar manner as the IL and IN samples and filters were frozen, shipped on ice overnight to USGS, and stored at -80°C until further processing. DNA was extracted directly using Mo Bio PowerWater® kit (MO BIO Laboratories, Carlsbad, California) according to instructions with one exception: final elution had two sequential additions (50 µL) of DNA elution buffer (PW6) for a final volume of 100 µL. DNA concentrations were measured by fluorometric quantitation (Qubit®, ThermoFisher Scientific, Waltham, MA). DNA extracts were used for the host-specific MST markers using the following primer/probe sets: Canine (DogBact, Dick, L. K. et. al. 2005; Griffith et. al., 2013): Forward: 5'- CGCTTGTATGTACCGGTACG, Reverse: 5'- CAATCGGAGTTCTTCGTG, and TaqMan® probe: [6-FAM]-5'- ATTCGTGGTGTAGCGGTGAAATGCTTAG- BHQ1; Gull (Gull2, Lu et al., 2008; Griffith et. al., 2013): Forward: 5'- TGCATCGACCTAAAGTTTTGAG, Reverse: 5'- GTCAAAGAGCGAGCAGTTACTA, and TaqMan® probe: [6-FAM]-5'- CTGAGAGGGTGATCGGCCACATTGGGACT-BHQ1; human (HF183, Green et. al., 2014): Forward: 5'- ATCATGAGTTCACATGTCCG, Reverse: 5'- CTTCCTCTCAGAACCCCTATCC, and TaqMan® probe: [6-FAM]-5'- CTAATGGAACGCATCCC-MGB; and human (Mnif, Johnston et. al., 2010; Gentry-Shields, et. al., 2012): Forward: 5'- GAAAGCGGAGGTCCTGAA, Reverse: 5'- ACTGAAAAACCTCCGCAAAC, and TaqMan® probe: [6-FAM]-5'- CCGGACGTGGTGTAACAGTAGCTA-BHQ1. 

Quantitative polymerase chain reaction assays were performed to quantify gene copies associated with targeted fecal sources using real-time PCR platform (Bio-Rad CFX Connect™ Real-time PCR Detection System, Bio-Rad, Hercules, California) in 96-well PCR plates with a reaction volume of 25 µl.  For the Mnif assay, qPCR cycling conditions were acquired from two different studies, and an optimization step using a temperature gradient to determine optimal annealing was performed. For all assays, quantitation was determined from standard curves obtained from serial dilutions of gBlocks® Gene Fragments (Integrated DNA Technologies, Coralville, Iowa) specific to MST markers. Results for MST are reported as copy numbers (CN)/100 mL; where copy number is the number of DNA molecules in a cell.

DNA extracts were randomly chosen (20%) and analyzed diluted and undiluted for each qPCR assay to determine inhibition; individual DNA extracts were diluted 5X, 10X, or 20X to achieve a concentration range of 2-5 ng total DNA. Samples were considered inhibited if Cq values (diluted and undiluted) were dissimilar relative to dilution. Lower limit of quantification (LLOQ) was determined for each qPCR assay and applied to all corresponding data; this was the average of at least two of the triplicate Cq values detected at the lowest concentration of the standard curve, and high reproducibility was observed. If a sample DNA Cq value was &lt; LLOQ, it was considered within the range of quantification (ROQ); if it was &gt; LLOQ, it was considered as detected but not quantifiable (DNQ) and was not included in statistical analysis.

Citations:

Dick, L.K., M.T. Simonich, and K.G. Field. 2005. Microplate subtractive hybridization to enrich for Bacteroidales genetic markers for fecal source identification. Appl. Environ. Microbiol. 71:3179-3183.

Griffith, J. F., et al. (2013). The California Microbial Source Identification Manual: A Tiered Approach to Identifying Fecal Pollution Sources to Beaches, Technical Report 804, Southern California Coastal Water Research Project, Costa Mesa, CA.

Lu, J., J.W. Santo Domingo, R. Lamendella, T. Edge, and S. Hill. 2008. Phylogenetic diversity and molecular detection of bacteria in gull feces. Appl. Environ. Microbiol. 74:3969-3976.

Green, H. C., et al. (2014). "Improved HF183 quantitative real-time PCR assay for characterization of human fecal pollution in ambient surface water samples." Applied and Environmental Microbiology 80(10): 3086-3094.

Gentry-Shields, J. R., Jakob G, Stewart, Jill R (2012). "HuBac and nifH source tracking markers display a relationship to land use but not rainfall." Water Research 46(18): 6163-6174.

Johnston, C., et al. (2010). "A real‐time qPCR assay for the detection of the nifH gene of Methanobrevibacter smithii, a potential indicator of sewage pollution." Journal of Applied Microbiology 109(6): 1946-1956.</procdesc>
        <srcused>Dick, L., et al., 2005</srcused>
        <srcused>Griffith, J. F., et al, 2013</srcused>
        <srcused>Green, Hyatt C., et al, 2014</srcused>
        <srcused>Johnston, C., et al., 2010</srcused>
        <srcused>Lu, J., J.W, 2008</srcused>
        <srcused>Gentry-Shields, J. R., et al, 2012</srcused>
        <procdate>20151202</procdate>
        <proccont>
          <cntinfo>
            <cntperp>
              <cntper>Ashley M Spoljaric</cntper>
              <cntorg>U.S. Geological, Great Lakes Science Center, Lake Michigan Ecological Research Station</cntorg>
            </cntperp>
            <cntaddr>
              <addrtype>mailing address</addrtype>
              <address>1574 Kemil Road N 300 E</address>
              <city>Chesterton</city>
              <state>IN</state>
              <postal>46304</postal>
              <country>United States</country>
            </cntaddr>
            <cntvoice>219-926-8336</cntvoice>
            <cntfax>219-929-5792</cntfax>
            <cntemail>aspoljaric@usgs.gov</cntemail>
          </cntinfo>
        </proccont>
      </procstep>
      <procstep>
        <procdesc>Second Release of "Identify sources of high E. coli concentrations, beaches of southern Lake Michigan, 2015" of data release:

Updated: 07/01/2020

First data release – (version 1.0, February 2018) 

Data amendment release – (version 2.0, July 2020)

The data were updated in July of 2020 to include additional data collected during this project.

Data included were E. coli and turbidity and microbial source tracking (MST).

The associated metadata xml file was updated to match the current data version. All reference to the additional data have been updated in the Entity and Attribute, Identification, and Data Quality (Source inputs) sections.</procdesc>
        <procdate>20200701</procdate>
      </procstep>
    </lineage>
  </dataqual>
  <eainfo>
    <detailed>
      <enttyp>
        <enttypl>Lat_Long_v2.csv</enttypl>
        <enttypd>This table contains information associated with sampling locations, including latitude and longitude.</enttypd>
        <enttypds>Producer defined</enttypds>
      </enttyp>
      <attr>
        <attrlabl>Location_ID</attrlabl>
        <attrdef>shortened location name representing the sampling locations</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>Indicates the Alphanumeric codes for sampling locations
.</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Location_name</attrlabl>
        <attrdef>Formal location name</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>Text field for formal location names for the sampling locations</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>State</attrlabl>
        <attrdef>State in which samples were collected</attrdef>
        <attrdefs>Producer Defined</attrdefs>
        <attrdomv>
          <udom>Options are:
WI, IL, and IN
See table Lat_Long.csv for specific information</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Latitude</attrlabl>
        <attrdef>Latitude in decimal degrees (WGS84)</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>Latitude for each location obtained from Indiana Beach Guard System (HW, HE, JP I and JP II) or Google Earth (WH, GC, JP1 and JP2, 63-1 and 63-2, and N1-N4)</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Longitude</attrlabl>
        <attrdef>Longitude in decimal degrees (WGS84)</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>Longitude for each location obtained from Indiana Beach Guard System (HW, HE, JP I and JP II) or Google Earth (WH, GC, JP1 and JP2, 63-1 and 63-2, and N1-N4)</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Comments</attrlabl>
        <attrdef>Additional information</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>pertinent additional sampling location information</udom>
        </attrdomv>
      </attr>
    </detailed>
    <detailed>
      <enttyp>
        <enttypl>E coli-turbidity_v2.csv</enttypl>
        <enttypd>This table contains E. coli densities and turbidity values for each location.</enttypd>
        <enttypds>Producer defined</enttypds>
      </enttyp>
      <attr>
        <attrlabl>Date</attrlabl>
        <attrdef>Field sample collection date</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>Field samples collections took place between June 11 and September 4, 2015.</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Location_ID</attrlabl>
        <attrdef>Sampling locations</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>See table Lat_Long.csv for specific information on these sampling locations.

N locations present mean data that were collected between the N1 and N4 locations listed in the lat lon table.</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>State</attrlabl>
        <attrdef>State in which sample was collected</attrdef>
        <attrdefs>Producer Defined</attrdefs>
        <attrdomv>
          <udom>Options are:
WI, IL, and IN
See table Lat_Long.csv for specific information</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Replicate</attrlabl>
        <attrdef>Replicate number</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>During sample collections, triplicate water samples (1-3) were collected at each location.</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Turbidity</attrlabl>
        <attrdef>Laboratory measured turbidity values</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <edom>
            <edomv>NA</edomv>
            <edomvd>Sample not analyzed</edomvd>
            <edomvds>Producer defined</edomvds>
          </edom>
        </attrdomv>
        <attrdomv>
          <rdom>
            <rdommin>0.34</rdommin>
            <rdommax>41.28</rdommax>
            <attrunit>NTU</attrunit>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Ecoli</attrlabl>
        <attrdef>Culture-based E. coli measurements</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <rdom>
            <rdommin>0.5</rdommin>
            <rdommax>24420.0</rdommax>
            <attrunit>MPN/100 mL</attrunit>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Comments</attrlabl>
        <attrdef>Additional sample information</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>Pertinent information regarding E. coli detection:
E. coli values less than 1 were replaced with 0.5</udom>
        </attrdomv>
      </attr>
    </detailed>
    <detailed>
      <enttyp>
        <enttypl>qpcr_v4.csv</enttypl>
        <enttypd>This table contains data related to qPCR assay results.</enttypd>
        <enttypds>Producer defined</enttypds>
      </enttyp>
      <attr>
        <attrlabl>Date</attrlabl>
        <attrdef>Field sample collection date</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>Field samples collections took place between June 11 and September 4, 2015.</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Location_ID</attrlabl>
        <attrdef>Sampling locations</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>See table Lat_Long.csv for specific information on these sampling locations</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>State</attrlabl>
        <attrdef>State in which samples were collected</attrdef>
        <attrdefs>Producer Defined</attrdefs>
        <attrdomv>
          <udom>Options are:
WI, IL, and IN
See table Lat_Long.csv for specific information</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Replicate</attrlabl>
        <attrdef>Replicate number</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>During sample collections, triplicate (IN, 1-3), or individual (1, WI, IL) water samples were collected at each location.</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>qPCR_assay</attrlabl>
        <attrdef>Target host-specific DNA marker</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>Dog: DogBact, canine-specific
Gull2: Gull-specific
HF183: Human-specific
Mnif: human-specific</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Cq</attrlabl>
        <attrdef>Quantification cycle. ND means "not detected" and refers to no target DNA detected in the qPCR assay.</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>The Cq is the quantification cycle or the cycle number in which the DNA fluorescence has increased above any background fluorescence.</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Starting_Quanitity_RX</attrlabl>
        <attrdef>Starting quantity. ND means "not detected" and refers to no target DNA detected in the qPCR assay.</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>Initial amount of DNA present in each sample per amount of genomic DNA added to reaction mixture.</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>CN</attrlabl>
        <attrdef>Copy numbers or amount of target DNA present in sample water: CN/100 mL=SQ* (100 uL DNA eluted/2 uL DNA per rx)*(100 mL/x mL filtered). "0" represents target DNA below detectable limits.</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <rdom>
            <rdommin>0.0</rdommin>
            <rdommax>1251500.0</rdommax>
            <attrunit>CN/100 mL</attrunit>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Detection</attrlabl>
        <attrdef>DNA marker detection status</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>DNQ: Detected but not quantifiable (below the limit of quantification)
ND: Not detected
ROQ: Detected within the range of quantification</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Statistical_analysis</attrlabl>
        <attrdef>Sample use in statistical analysis</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <edom>
            <edomv>NA</edomv>
            <edomvd>Data analysis not performed</edomvd>
            <edomvds>Producer defined</edomvds>
          </edom>
        </attrdomv>
        <attrdomv>
          <udom>No: Sample not used in statistical analysis
Yes: Sample used in statistical analysis</udom>
        </attrdomv>
      </attr>
    </detailed>
    <detailed>
      <enttyp>
        <enttypl>SanitarySurvey.csv</enttypl>
        <enttypd>This table contains sanitary survey data collected in conjunction with water sample collections.</enttypd>
        <enttypds>Producer defined</enttypds>
      </enttyp>
      <attr>
        <attrlabl>Date</attrlabl>
        <attrdef>Field sample collection date</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>Sanitary surveys were performed between June 11 and September 4, 2015.</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Location_ID</attrlabl>
        <attrdef>Sampling locations</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>See table Lat_Long.csv for specific information on these sampling locations.</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Time</attrlabl>
        <attrdef>Sampling time</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>Time in which sanitary surveys were performed (HH:MM AM)</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Air_Temp</attrlabl>
        <attrdef>Field measured air temperature. NA=not measured.</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <edom>
            <edomv>NA</edomv>
            <edomvd>Data not collected</edomvd>
            <edomvds>Producer defined</edomvds>
          </edom>
        </attrdomv>
        <attrdomv>
          <rdom>
            <rdommin>14.8</rdommin>
            <rdommax>31.6</rdommax>
            <attrunit>Degrees Celsius</attrunit>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Water_Temp</attrlabl>
        <attrdef>Field measured water temperature. NA=not measured.</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <edom>
            <edomv>NA</edomv>
            <edomvd>Data not collected</edomvd>
            <edomvds>Producer defined</edomvds>
          </edom>
        </attrdomv>
        <attrdomv>
          <rdom>
            <rdommin>14.8</rdommin>
            <rdommax>26.5</rdommax>
            <attrunit>Degrees Celsius</attrunit>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Wind_Spd</attrlabl>
        <attrdef>Field measured wind speed. NA=not measured.</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <edom>
            <edomv>NA</edomv>
            <edomvd>Data not collected</edomvd>
            <edomvds>Producer defined</edomvds>
          </edom>
        </attrdomv>
        <attrdomv>
          <udom>Wind speed measured with an anemometer. Ranged from 0/calm-8 m/s

There are some zeros in the data file with a corresponding wind direction in the Wind_Dir column. While this may seem illogical, the winds were below the anemometer's detection limit, but field technicians were able to distinguish and record a wind direction.</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Wind_Dir</attrlabl>
        <attrdef>Field measured wind direction. NA=not measured</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <edom>
            <edomv>NA</edomv>
            <edomvd>Data not collected</edomvd>
            <edomvds>Producer defined</edomvds>
          </edom>
        </attrdomv>
        <attrdomv>
          <udom>Cardinal wind direction estimated by field technician.
Calm in this column refers to no detectable wind direction.</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Sky_Cond</attrlabl>
        <attrdef>Field measured sky conditions. NA=not measured.</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <edom>
            <edomv>NA</edomv>
            <edomvd>Data not collected</edomvd>
            <edomvds>Producer defined</edomvds>
          </edom>
        </attrdomv>
        <attrdomv>
          <udom>Sky conditions describes the predominant sky condition (see below) related to cloud cover (next column), which is divided into eighths, of the sky covered by opaque clouds.

Sky condition observed by field technician.

Options:
Sunny
Mostly Sunny
Partly Sunny
Mostly Cloudy
Cloudy</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Cloud_Cover</attrlabl>
        <attrdef>Field measured cloud cover. NA=not measured.</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <edom>
            <edomv>NA</edomv>
            <edomvd>Data not collected</edomvd>
            <edomvds>Producer defined</edomvds>
          </edom>
        </attrdomv>
        <attrdomv>
          <udom>Amount of cloud cover (fraction) estimated by field technicians.

Options:
No clouds
1/8-2/8
3/8-1/2
5/8-7/8
Total coverage</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Prior_Rain</attrlabl>
        <attrdef>Previous rainfall. NA=not measured.</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <edom>
            <edomv>NA</edomv>
            <edomvd>Data not collected</edomvd>
            <edomvds>Producer defined</edomvds>
          </edom>
        </attrdomv>
        <attrdomv>
          <udom>Rainfall previous to sample collection time, estimated by field technicians.

Options:
Less than 24, Less than 48, Less than 72, greater than 72 hours</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Wave_Hgt</attrlabl>
        <attrdef>Field measured wave height. NA=not measured.</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <edom>
            <edomv>NA</edomv>
            <edomvd>Data not collected</edomvd>
            <edomvds>Producer defined</edomvds>
          </edom>
        </attrdomv>
        <attrdomv>
          <udom>Wave height (inches) measured with meter stick by field technicians.

At times, wave height could not be measure with a meter stick (waves too low or too high), therefore the values were estimated, specifically, less than 1, 28+, and 26+ inches were used.</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Current_Time</attrlabl>
        <attrdef>Field measured current time: How long (seconds) it takes for a bobber placed in the middle of two field flags positioned in the water (45 cm depth) parallel to the shore and spaced 182 cm to reach a given flag (91 cm). NA=not measured and 0= no current.</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <edom>
            <edomv>NA</edomv>
            <edomvd>Data not collected</edomvd>
            <edomvds>Producer defined</edomvds>
          </edom>
        </attrdomv>
        <attrdomv>
          <rdom>
            <rdommin>0.0</rdommin>
            <rdommax>240.0</rdommax>
            <attrunit>seconds</attrunit>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Current_Spd</attrlabl>
        <attrdef>Calculated current speed: 91 cm/Current_Time. NA=not measured and 0= no current.</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <edom>
            <edomv>NA</edomv>
            <edomvd>Data not collected</edomvd>
            <edomvds>Producer defined</edomvds>
          </edom>
        </attrdomv>
        <attrdomv>
          <rdom>
            <rdommin>0.0</rdommin>
            <rdommax>45.5</rdommax>
            <attrunit>cm/s</attrunit>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Current_Dir</attrlabl>
        <attrdef>Field measured current direction. NA=not measured.</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <edom>
            <edomv>NA</edomv>
            <edomvd>Data not collected</edomvd>
            <edomvds>Producer defined</edomvds>
          </edom>
        </attrdomv>
        <attrdomv>
          <udom>Direction in which bobber traveled when determining Current_Time; observed by field technician.

Options:

East, west, none</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Observations</attrlabl>
        <attrdef>Field observations</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>General conditions observed by field technician at/near the study location. Information pertinent to sanitary conditions such as, trash, fecal droppings, shorebird feathers, location of shorebirds, algal accumulations, etc...</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Comments</attrlabl>
        <attrdef>Additional information related to data collection</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>Pertinent field data collection information related to data collection</udom>
        </attrdomv>
      </attr>
    </detailed>
    <detailed>
      <enttyp>
        <enttypl>SanitarySurvey_birds.csv</enttypl>
        <enttypd>This table contains shorebird count data recorded during sanitary surveys.</enttypd>
        <enttypds>Producer defined</enttypds>
      </enttyp>
      <attr>
        <attrlabl>Date</attrlabl>
        <attrdef>Sample collection date</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>Field samples collections took place between June 11 and September 4, 2015.</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Location_ID</attrlabl>
        <attrdef>Sampling locations</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <udom>See table Lat_Long.csv for specific information on these sampling locations.</udom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Gulls_water</attrlabl>
        <attrdef>Number of gulls counted in the water</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <rdom>
            <rdommin>0</rdommin>
            <rdommax>46</rdommax>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Geese_water</attrlabl>
        <attrdef>Number of geese counted in the water</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <rdom>
            <rdommin>0</rdommin>
            <rdommax>50</rdommax>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Ducks_water</attrlabl>
        <attrdef>Number of ducks counted in the water</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <rdom>
            <rdommin>0</rdommin>
            <rdommax>2</rdommax>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Cormorant_water</attrlabl>
        <attrdef>Number of cormorants counted in the water</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <rdom>
            <rdommin>0</rdommin>
            <rdommax>40</rdommax>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Total_water</attrlabl>
        <attrdef>Sum of all shore birds counted in the water</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <rdom>
            <rdommin>0</rdommin>
            <rdommax>50</rdommax>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Gulls_beach</attrlabl>
        <attrdef>Number of gulls counted on the beach.</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <rdom>
            <rdommin>0</rdommin>
            <rdommax>170</rdommax>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Geese_beach</attrlabl>
        <attrdef>Number of geese counted on the beach</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <rdom>
            <rdommin>0</rdommin>
            <rdommax>46</rdommax>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Crane_beach</attrlabl>
        <attrdef>Number of cranes counted on the beach</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <rdom>
            <rdommin>0</rdommin>
            <rdommax>1</rdommax>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Plover_beach</attrlabl>
        <attrdef>Number of plovers counted on the beach</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <rdom>
            <rdommin>0</rdommin>
            <rdommax>5</rdommax>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Misc_beach</attrlabl>
        <attrdef>Number of miscellaneous birds counted on the beach</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <rdom>
            <rdommin>0</rdommin>
            <rdommax>8</rdommax>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Total_beach</attrlabl>
        <attrdef>Sum of all birds counted on the beach. On 6/18/15 at JP1, additional gulls were counted on the backshore side of the survey location and was added to Total_beach.</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <rdom>
            <rdommin>0</rdommin>
            <rdommax>170</rdommax>
          </rdom>
        </attrdomv>
      </attr>
      <attr>
        <attrlabl>Total_birds</attrlabl>
        <attrdef>Sum of all birds counted on the beach and in the water.</attrdef>
        <attrdefs>Producer defined</attrdefs>
        <attrdomv>
          <rdom>
            <rdommin>0</rdommin>
            <rdommax>174</rdommax>
          </rdom>
        </attrdomv>
      </attr>
    </detailed>
  </eainfo>
  <distinfo>
    <distrib>
      <cntinfo>
        <cntperp>
          <cntper>GS ScienceBase</cntper>
          <cntorg>U.S. Geological Survey</cntorg>
        </cntperp>
        <cntaddr>
          <addrtype>mailing address</addrtype>
          <address>Denver Federal Center, Building 810, Mail Stop 302</address>
          <city>Denver</city>
          <state>CO</state>
          <postal>80225</postal>
          <country>United States</country>
        </cntaddr>
        <cntvoice>1-888-275-8747</cntvoice>
        <cntemail>sciencebase@usgs.gov</cntemail>
      </cntinfo>
    </distrib>
    <distliab>Unless otherwise stated, all data, metadata and related materials are considered to satisfy the quality standards relative to the purpose for which the data were collected. Although these data and associated metadata have been reviewed for accuracy and completeness and approved for release by the U.S. Geological Survey (USGS), no warranty expressed or implied is made regarding the display or utility of the data for other purposes, nor on all computer systems, nor shall the act of distribution constitute any such warranty.</distliab>
    <stdorder>
      <digform>
        <digtinfo>
          <formname>Digital Data</formname>
        </digtinfo>
        <digtopt>
          <onlinopt>
            <computer>
              <networka>
                <networkr>https://doi.org/10.5066/F7H70F3D</networkr>
              </networka>
            </computer>
          </onlinopt>
        </digtopt>
      </digform>
      <fees>None</fees>
    </stdorder>
  </distinfo>
  <metainfo>
    <metd>20250401</metd>
    <metc>
      <cntinfo>
        <cntorgp>
          <cntorg>Great Lakes Science Center</cntorg>
        </cntorgp>
        <cntaddr>
          <addrtype>mailing and physical</addrtype>
          <address>1451 Green Road</address>
          <city>Ann Arbor</city>
          <state>MI</state>
          <postal>48105</postal>
          <country>US</country>
        </cntaddr>
        <cntvoice>734-994-3331 </cntvoice>
        <cntemail>GS_ASK_GLSC@usgs.gov</cntemail>
      </cntinfo>
    </metc>
    <metstdn>FGDC CSDGM</metstdn>
    <metstdv>FGDC-STD-001-1998</metstdv>
    <metuc>Record created using USGS Metadata Wizard tool. (https://github.com/usgs/fort-pymdwizard)</metuc>
  </metainfo>
</metadata>
