Tonie E. Rocke
Robin E. Russell
20191015
Survival of prairie dogs (Cynomys spp.) challenged with Yersina pestis (plague)
spreadsheet
https://doi.org/10.5066/P9AZREUM
Robin E. Russell
Daniel W. Tripp
Tonie E. Rocke
20191002
Differential plague susceptibility in species and populations of prairie dogs
publication
n/a
Wiley
https://doi.org/10.1002/ece3.5684
These data represent the number of days a prairie dog survived after challenge with highly virulent Yeresinia pestis.
The data were collected to serve as controls for vaccinated animals also challenged with Yersina pestis.
20010501
20110901
ground condition
None planned
-114.6973
-93.7793
45.8900
25.7207
South Dakota, Texas, Utah, Arizona, Colorado
ISO 19115 Topic Category
biota
None
prairie dogs
plague
disease susceptibility
survival analyses
USGS Metadata Identifier
USGS:5cd1d739e4b09b8c0b7a5864
Common geographic areas
South Dakota
Utah
Arizona
Texas
Colorado
None. Please see 'Distribution Info' for details.
None. Users are advised to read the data set's metadata thoroughly to understand appropriate use and data limitations.
Robin E Russell
U.S. Geological Survey
Research Statistician
mailing address
6006 Schroeder Road
Madison
WI
53711
United States
608-270-2474
608-270-2415
rerussell@usgs.gov
This work was supported by Colorado Parks and Wildlife, and Colorado’s Species Conservation Trust Fund.
None
Cynomys gunnisoni
Cynomys ludovicianus
Cynomys parvidens
Cynomys leucurus
Kingdom
Animalia
Subkingdom
Bilateria
Infrakingdom
Deuterostomia
Phylum
Chordata
Subphylum
Vertebrata
Infraphylum
Gnathostomata
Superclass
Tetrapoda
Class
Mammalia
Subclass
Theria
Infraclass
Eutheria
Order
Rodentia
Suborder
Sciuromorpha
Family
Sciuridae
Subfamily
Xerinae
Tribe
Marmotini
Genus
Cynomys
Subgenus
Cynomys (Leucocrossuromys)
Species
Cynomys gunnisoni
TSN: 180184
Species
Cynomys parvidens
TSN: 180187
Species
Cynomys leucurus
TSN: 180185
Subgenus
Cynomys (Cynomys)
Species
Cynomys ludovicianus
TSN: 180186
None.
None.
We excluded one data set from a population in South Dakota of unknown location.
Joseph D. Busch
Roger Van Andel
Nathan E. Stone
Kacy R. Cobble
Roxanne Nottingham
Judy Lee
Michael VerSteeg
Jeff Corcoran
Jennifer Cordova
William Van Pelt
Megan M. Shuey
Jeffrey T. Foster
James M. Schupp
Stephen Beckstrom-Sternberg
James Beckstrom-Sternberg
Paul Keim
Susan Smith
Julia Rodriguez-Ramos
Judy L. Williamson
Tonie E. Rocke
David M. Wagner
201310
The innate immune response may be important for surviving plague in wild Gunnison's prairie dogs
publication
Journal of Wildlife Diseases
vol. 49, issue 4
n/a
Wildlife Disease Association
ppg. 920-931
https://doi.org/10.7589/2012-08-209
Digital and/or Hardcopy
20131001
publication date
Busch_2013
Data from this publication was consolidated for this data release.
J. S. Mencher
S. R. Smith
T. D. Powell
D. T. Stinchcomb
J. E. Osorio
T. E. Rocke
20040820
Protection of Black-Tailed Prairie Dogs (Cynomys ludovicianus) against Plague after Voluntary Consumption of Baits Containing Recombinant Raccoon Poxvirus Vaccine
publication
Infection and Immunity
vol. 72, issue 9
n/a
American Society for Microbiology
ppg. 5502-5505
https://doi.org/10.1128/IAI.72.9.5502-5505.2004
Digital and/or Hardcopy
20040820
publication date
Mencher_2004
Data from this publication was consolidated for this data release.
Tonie E. Rocke
Judy Williamson
Kacy R. Cobble
Joseph D. Busch
Michael F. Antolin
David M. Wagner
201202
Resistance to Plague Among Black-Tailed Prairie Dog Populations
publication
Vector-Borne and Zoonotic Diseases
vol. 12, issue 2
n/a
Mary Ann Liebert Inc
ppg. 111-116
https://doi.org/10.1089/vbz.2011.0602
Digital and/or Hardcopy
20120208
publication date
Rocke_2012
Data from this publication was consolidated for this data release.
Tonie Rocke
Brock Kingstad-Bakke
Willy Berlier
Jorge Osorio
20141027
A Recombinant Raccoon Poxvirus Vaccine Expressing both Yersinia pestis F1 and Truncated V Antigens Protects Animals against Lethal Plague
publication
Vaccines
vol. 2, issue 4
n/a
MDPI AG
ppg. 772-784
https://doi.org/10.3390/vaccines2040772
Digital and/or Hardcopy
20141027
publication date
Rocke_2014
Data from this publication was consolidated for this data release.
Tonie E. Rocke
Dan Tripp
Faye Lorenzsonn
Elizabeth Falendysz
Susan Smith
Judy Williamson
Rachel Abbott
20150115
Age at Vaccination May Influence Response to Sylvatic Plague Vaccine (SPV) in Gunnison’s Prairie Dogs (Cynomys gunnisoni)
publication
EcoHealth
vol. 12, issue 2
n/a
Springer Nature
ppg. 278-287
https://doi.org/10.1007/s10393-014-1002-3
Digital and/or Hardcopy
20150601
publication date
Rocke_2015
Data from this publication was consolidated for this data release.
Tonie E. Rocke
Nicola Pussini
Susan R. Smith
Judy Williamson
Bradford Powell
Jorge E. Osorio
201002
Consumption of Baits Containing Raccoon Pox-Based Plague Vaccines Protects Black-Tailed Prairie Dogs (Cynomys ludovicianus)
publication
Vector-Borne and Zoonotic Diseases
vol. 10, issue 1
n/a
Mary Ann Liebert Inc
ppg. 53-58
https://doi.org/10.1089/vbz.2009.0050
Digital and/or Hardcopy
20100206
publication date
Rocke_2010
Data from this publication was consolidated for this data release.
Tonie E. Rocke
Susan R. Smith
Dan T. Stinchcomb
Jorge E. Osorio
200810
Immunization of black‐tailed prairie dog against plague through consumption of vaccine‐laden baits
publication
Journal of Wildlife Diseases
vol. 44, issue 4
n/a
Wildlife Disease Association
ppg. 930-937
https://doi.org/10.7589/0090-3558-44.4.930
Digital and/or Hardcopy
20081001
publication date
Rocke_2008
Data from this publication was consolidated for this data release.
We consolidated data from several published and unpublished studies, in which prairie dogs were challenged with virulent Y. pestis via subcutaneous injection of 3500 mouse 50% lethal doses (MLD50) to assess the ability of SPV to protect prairie dogs. These data included a total of 305 prairie dogs that were not vaccinated (controls) or received placebo bait. One hundred Gunnison's prairie dogs (Cynomys gunnisoni), from two states, and 143 black-tailed prairie dogs (C. ludovicianus) from three states, were included from previous publications, as well as data from two unpublished studies, including 21 Utah prairie dogs (C. parvidens) and 15 white-tailed prairie dogs (C. leucurus) from Colorado. In addition, we included one group of 10 white-tailed prairie dogs from the same Colorado population that were challenged with 10x the standard dose (35,000 MLD50).
20110901
Challenge inocula of fully virulent Y. pestis strain CO92 were prepared as previously described (Osorio et al. 2003). Briefly, standard aliquots of Y. pestis of known MLD50 (confirmed to kill 50% of test mice), stored frozen in glycerol at -20°C, were thawed and diluted in 1x phosphate buffered saline (PBS) to achieve the desired dosage of challenge inoculum (in MLD50). Prairie dogs were restrained by hand and injected subcutaneously with 0.2 ml of the inoculum. For the larger dose (35,000 MLD50), the inoculum was divided and injected subcutaneously at 6 different injection sites, to simulate multiple flea bites. In every experiment, the challenge inoculum was also injected simultaneously in laboratory mice to confirm the intended dosage, and in every challenge this dosage was achieved.
20110901
PrairieDogSurvival.csv
Comma Separated Value (CSV) file containing data.
Producer Defined
Day of Death
day post-challenge prairie dog died
Producer Defined
3
30
Censored
Whether the animal lived until the end of the study or died during the study
Producer Defined
0
no; the animal died during the study
Producer defined
1
yes; the animal lived until the end of the study
Producer defined
Species
Species of prairie dog
Producer Defined
black-tailed
Cynomys ludovicianus
Producer defined
Gunnison's
Cynomys gunnisoni
Producer defined
white-tailed
Cynomys leucurus
Producer defined
Utah
Cynomys parvidens
Producer defined
Publication
previous publication for reference
Producer Defined
Rocke_2008
Rocke, T.E., S.R. Smith, D.T. Stinchcomb, and J.E. Osorio. 2008. Immunization of black-tailed prairie dog against plague through consumption of vaccine-laden baits. Journal of Wildlife Diseases. 44:930-937.
Producer defined
Mencher_2004
Mencher, J.S., S.R. Smith, T.D. Powell, D.T. Stinchcomb, J.E. Osorio, and T.E. Rocke. 2004. Protection of black-tailed prairie dogs (Cynomys ludovicianus) against plague after voluntary consumption of baits containing recombinant raccoon poxvirus vaccine. Infection and Immunity. 72:5502–5505.
Producer defined
Rocke_2010
Rocke, T.E., N. Pussini, S.R. Smith, J. Williamson, B. Powell, and J.E. Osorio. 2010. Consumption of baits containing raccoon pox-based plague vaccines protects black-tailed prairie dogs (Cynomys ludovicianus). Vector-Borne and Zoonotic Diseases. 10:53–58.
Producer defined
Rocke_2014
Rocke, T.E., B. Kingstad-Bakke, W. Berlier , J.E. Osorio. 2014. A recombinant raccoon poxvirus vaccine expressing both Yersinia pestis F1 and truncated V antigens protects animals against lethal plague. Vaccines. 2:772–84.
Producer defined
Rocke_2012
Rocke, T.E., J. Williamson, K.R. Cobble, J. D. Busch, M. F. Antolin, and D. M. Wagner. 2012. Resistance to plague among black-tailed prairie dog populations. Vector-Borne and Zoonotic Diseases. 12:111–116.
Producer defined
Busch_2013
Busch, J. D., R. Van Andel, N. E. Stone, K. R. Cobble, R. Nottingham, J. Lee, M. VerSteeg, J. Corcoran, J. Cordova, W. Van Pelt, and M. M. Shuey. 2013. The innate immune response may be important for surviving plague in wild Gunnison's prairie dogs. Journal of Wildlife Diseases. 49: 920–931.
Producer defined
unpublished
Data from an unpublished study
Producer defined
Rocke 2015
Rocke, T.E., D. Tripp, F. Lorenzsonn, E. Falendysz, S. Smith, J. Williamson, and R. Abbott. 2015. Age at vaccination may influence response to sylvatic plague vaccine (SPV) in Gunnison’s prairie dogs (Cynomys gunnisoni). EcoHealth. 12:278–87.
Producer defined
State
state where animals were collected
Producer Defined
South Dakota
South Dakota
Producer defined
Colorado
Colorado
Producer defined
Texas
Texas
Producer defined
Arizona
Arizona
Producer defined
Utah
Utah
Producer defined
U.S. Geological Survey
GS ScienceBase
mailing address
Denver Federal Center, Building 810, Mail Stop 302
Denver
CO
80225
United States
1-888-275-8747
sciencebase@usgs.gov
Unless otherwise stated, all data, metadata and related materials are considered to satisfy the quality standards relative to the purpose for which the data were collected. Although these data and associated metadata have been reviewed for accuracy and completeness and approved for release by the U.S. Geological Survey (USGS), no warranty expressed or implied is made regarding the display or utility of the data on any other system or for general or scientific purposes, nor shall the act of distribution constitute any such warranty.
Digital Data
https://doi.org/10.5066/P9AZREUM
None
20200821
Robin E Russell
U.S. Geological Survey
Research Statistician
mailing address
6006 Schroeder Road
Madison
WI
53711
United States
608-270-2474
608-270-2415
rerussell@usgs.gov
FGDC Biological Data Profile of the Content Standard for Digital Geospatial Metadata
FGDC-STD-001.1-1999